Hi! I want to retrieve values of dn and ds for human/mouse gene comparisons in Ensembl using BiomaRt (R application), but now in the list of attributes
ensembl <- useEnsembl(biomart='ensembl')
ensembl <- useDataset('hsapiens_gene_ensembl', mart=ensembl)
att = listAttributes(ensembl)
It is not appear the dN or dS attributes related that appeared in previous versions ("dN with Mouse" and "dS with Mouse")
Just appear:
Mouse gene stable ID
Mouse gene name
Mouse protein or transcript stable ID
Mouse chromosome/scaffold start (bp)
Mouse chromosome/scaffold end (bp)
Query protein or transcript ID
Last common ancestor with Mouse Mouse homology type
%id. target Mouse gene identical to query gene
%id. query gene identical to target Mouse gene
Mouse Gene-order conservation score
Mouse Whole-genome alignment coverage
Any idea where can I found it?
did you find anything?