Is there such thing as GVCF for structural variants allowing population genetics on SVs?
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3.0 years ago

When calling dbsnps and indels you can check positions of rare variants in all other samples by calling the together, generating gvcf file that contains information on all sites with a detected mutation in a population. So i wonder if there is such thing in for structural variants callers as well, specifically Manta and TIDDIT?

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