Group comparison of CNA between primary and metastatic samples

Question

[AshNY]

Dear all,

I am trying to find significantly different CNA between human cancer primary samples and their metastatic samples. My data is from WGS and I have already segmentaiton file.

GISTIC2.0 provides significant CNA evet in a cohort, but does not have comparison function between two groups.

Is there any way to compare CNA event between groups?

Thanks.

Answer 1

[justsing63]

Hi,

I also try to find a way to compare CNA event between groups. Have you find something since you write this post ?

Thanks