MLPA analysis with Genemaker is a pain
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3.0 years ago
ManuelDB ▴ 110

Anyone doing or have done MLPA analysis with Genemaker. In our clinical lab, geneticists are analysing methylation with many samples. Samples are paired (the undigested as control and the digested that is the patient sample). Each time you generated the analysis you have to select what are all the undigested samples (population normalization) what is the undigested and what is the digested sample of the patient you want to see. This is a pain and very time-consuming. 30 patients is around 6 hours when this could be done in a minute.

I have been asked for some automatization. Reading the documentation there is a grouping samples tool but when I match paired samples, then after running the analysis this seems is not working at all and the manual selection each time you analysis a patient must be done again.

I was wondering if someone here could tell me how could I do this.

Genemaker • 452 views
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