Why does my ATAC trace only have 1 peak while everything is OK?
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2.9 years ago
631079064 • 0

I strictly abide by the 10x genomics scATAC-seq protocol, and the quality of nuclei is very good. However, my data trace only have 1 peak at 200 bp.

I wonder if the transposon enzyme digested too much.

Thank you for your help!
genomics 10x ATAC-seq • 615 views
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What are we talking about? Bioanalyzer/TapeStation, or alignment results?

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