Entering edit mode
2.9 years ago
dragon940401
•
0
Hi, I wanna get hg38 tbl file(hg38 genome fraction statistics)
So, I download hg38.fa.out file from here : https://www.repeatmasker.org/species/hg.html - hg38 - Dec 2013 - RepeatMasker open-4.0.6 - Dfam 2.0
I got hg38.fa.out file and hg38.fa.align file
I though that i read hg38.fa.out and convert this to hg38.fa.tbl. i guess tbl file was statistics file from genome fraction.
format of tbl file that i think is below.
==================================
number of length percentage
elements* occupied of sequence
---------------------------------------------------------
SINEs: {Number} {Number} bp {percentage} %
ALUs {Number} {Number} bp {percentage} %
MIRs {Number} {Number} bp {percentage} %
etc...
Can i convert hg38.fa.out to hg38.fa.tbl? If this is possible, How can i do this?
Thank you!