Installing Bio::DB::Big::File on Ubuntu (Building and testing...)
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2.9 years ago

Hi everyone, I'm trying to install VEP, I already downloaded all the recommended PERL libraries/dependencies/modules But I still have a problem with Bio::DB::Big::File and Bio::DB::Big::AutoSQL They asked for lib big wig.

I've found three ways to install this (in my understanding): sudo apt-get install libbigwig-dev sudo apt-get install libbigwig-doc

and cpanm Alien::LibBigWig (it seems the only way to install BigFile through cpanm and the only one that actually works)

However I get this

cpanm -i Bio::DB::Big::File --> Working on Bio::DB::Big::File Fetching http://www.cpan.org/authors/id/A/AY/AYATES/Bio-DB-Big-v1.0.1.tar.gz ... OK Configuring Bio-DB-Big-v1.0.1 ... OK Building and testing Bio-DB-Big-v1.0.1 ...

and it's stuck forever does anyone have a clue what to do? thanks

Library Module Perl Ubuntu • 1.2k views
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how long is forever? Some compilations and tests can take hours...

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