Copy Number Variant detection without control
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2.9 years ago

I'm trying to detect for the Copy number variants (CNVs) from Whole Exome Sequencing (WES) data.

However, the catch is I do not have a control data.

Can you please suggest a tool for the detection of CNVs from WES data?

Thank You

WES CNV • 724 views
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2.9 years ago
shiyang_bio ▴ 170

CNVkit can do this by setting a "flat" control

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Thank You. We will explore this option in 'CNVkit'

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