AFD plot for each VCF file
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2.9 years ago
anasjamshed ▴ 140

I have 2 test directories:

dir

and one tsv file that contains information about the population:

pop

I want to write a piece of code that will create an AFD plot for each VCF file in a folder

The output should be an AFD dot plot for each VCF file in the directory. The plot should give the AFD between population 1 (diploids) and population 2 (tetraploids)

Is this work possible through python? Is there any package which I can use?

python Allele • 765 views
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