How to generate a Venn diagram from edgeR results?

Question

[Riku]

Hi, all.

I would like to plot the number of DEGs between 5 samples in "Draw Venn Diagram". I have the following file outputed by edgeR, how should I prepare the gene list?

sampleA sampleB logFC   logCPM  PValue  FDR

Best regards,

Answer 1

[Peter]

First of all think about the question you are asking very clearly. The easiest method for you to do Venns, get the gene names of interest per category and paste them into here: https://bioinfogp.cnb.csic.es/tools/venny/