Entering edit mode
3.1 years ago
dahun73
▴
10
Hello :)
When I use cellranger for snRNA-seq data, it is confusing whether output is correct or not.
I used '--include-introns' parameter because we should detect pre-mRNA. In web summary, however, we can see the error message for 'Fraction Reads in Cells' section. In 10X genomics Q&A, we should use '--include-introns' parameter because 10X genomics do not serve reference for snRNA-seq. So, it this web summary normal?
