does bioconductor/bioconductor_docker:RELEASE_X_Y install CRAN packages from a fixed snapshot?

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2.8 years ago

mk ▴ 300

Question:

Does a container instantiated from bioconductor_docker:RELEASE_X_Y also pull CRAN packages from reproducible image (e.g. via MRAN) and if not how do I accomplish this?

Motivation:

I'm building an image with both Bioconductor and CRAN packages and want versions of both repositories pinned to a specific date.

Background:

The Bioconductor docker documentation mentions rocker/rstudio.

However, unlike rocker/r-ver, the above images do not seem to be pinned to any reproducible CRAN image (e.g. MRAN in the case of rocker/r-ver)

NB: this question is cross-posted on stack here

R Bioconductor docker • 700 views

ADD COMMENT • link 2.8 years ago by mk ▴ 300

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Bioconductor has its own biostars forum https://support.bioconductor.org/

ADD REPLY • link 2.8 years ago by Jeremy Leipzig 22k

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thanks! I'll add this question there as well.

ADD REPLY • link 2.8 years ago by mk ▴ 300

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