linking exons and introns when plotting from genbank file?
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2.7 years ago
mrmrwinter ▴ 30

Hi all,

I'm currently making plots of a genomic region using this package, DNA Features Viewer, (available here: https://edinburgh-genome-foundry.github.io/DnaFeaturesViewer/) and getting good results.

Right now i am plotting straight from a genbank file that im curating manually. What i want to know, is that is there a way to link exons with introns in a genbank file, so that when i plot it i can get the intron "line" between the exons as seen in many other CDS plotting figures?

DNA features viewer wont let me assign tracks to given feature types, so one way i can see around this to get exons of a protein all on the same track s to link them with the intron line.

Has anyone any experience with this?

Many thanks

exons genbank plotting dna_features_viewer introns • 445 views
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