Running Galaxy tools on a HPC cluster using CLI?

Question

[liorglic]

Is there a way to get Galaxy tools and workflows to run as command line tools on my institute's HPC cluster (or any local server)? I was unable to find such documentation on the Galaxy project website, but it seems strange that CLI would not be available. Anybody aware of such an option and can direct me to the relevant documentation?

[cpad0112]

read about bioblend and cloudman api. These APIs allow galaxy access via scripting. AFAIK, native CLI may not be available.

[Wayne]

Following on that, this older answer that also points out Galaxy includes API access mentions the Galaxy Tool Shed where you can drill down and usually find the command line tools wrapped by various Galaxy-based tools in order to alternatively use them directly on your cluster.