SRST2
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2.7 years ago

Hi everyone,

I've been trying to do the srst2 analysis in my ubuntu and from the github page here I'm trying out the command: getmlst.py --species 'Escherichia coli#1'

But I'm getting the following error:

Traceback (most recent call last): File "/usr/local/bin/getmlst.py", line 199, in <module> main() File "/usr/local/bin/getmlst.py", line 118, in main from django.confo.urls import url ModuleNotFoundError: No module named 'django.confo'

I tried this in the mpa environment and also in the conda environment but still gives the same error. I have installed django using pip.

This is the script portion, in case you wanna have a look at that:

def main(): from django.confo.urls import url args = parse_args() docFile = url.urlopen(args.repository_url)

This gave an error saying name url not found and i read that i needed to isntall django for that.

Could someone please help me out? Thanks in advance!

ubuntu metagenomics srst2 • 431 views
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