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2.7 years ago
shakyaram079
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How to get the unique variants in all 120 bgzip and tabix indexed vcf files using bcf tools ? Each unique variant should be counted as 1 across all samples. After merging all unique variants into a single vcf file, how to rename the chromosome arabic numbers into roman numbers using bcf tools ? Thanks.
Get Unique variants (SNPs and Indels) using bcf tools
Replacing the Chr names and position notions in vcf