Deseq2 output to ActivePathways

Question

[rahel14350]

Dear all, Is there anyway to convert DEG output of Deseq2 to the P-value matrix input of ActivePathway package (https://github.com/reimandlab/ActivePathways).

> head(scores)
          X3UTR      X5UTR       CDS  promCore
A2M          NA 0.33396764 0.9051708 0.4499201
AAAS         NA 0.42506012 0.7047723 0.7257641
ABAT  0.9664126 0.04202735 0.7600985 0.1903789
ABCC1 0.9383432 0.45994435 0.2599319 0.2980455
ABCC5 0.8021028 0.44789017 0.4788846 0.8447995
ABCC8        NA 0.46993557 0.6890250 0.9226617

Kind Regards, Rahel

[Basti]

As indicated in your link, just create a matrix with your p-values from your output