Extract the sequence
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2.6 years ago
zhichusun ▴ 10

I have different list files each containing different sequence IDs, I want to extract gene sequences from a fasta according to different list files and generate different fasta files according to different lists. For example, list1: >gene1, >gene2, list2:>gene3, and gene4 extract the sequences to obtain list1.fasta and list2.fasta. Thank you for your help.

sequence • 459 views
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I want to extract gene sequences from a fasta

How To Extract A Sequence From A Big (6Gb) Multifasta File ?

according to different list files and generate different fasta files according to different lists.

https://www.cyberciti.biz/faq/bash-for-loop/

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