Predicting celltype from only single cell ATAC Seq analysis
0
0
Entering edit mode
2.6 years ago

I am analyzing single-cell multi-omics ATAC seq data and I do not have sc RNA seq data. Is it possible to predict cell type from only sc ATAC seq data in SEURAT?

Single-Cell ATAC-Seq Seurat Multiomics • 671 views
ADD COMMENT
0
Entering edit mode

I think theoretically it should be possible. Have you tried to look at the accessibility of the promotor regions near the marker genes?

ADD REPLY
0
Entering edit mode
ADD REPLY

Login before adding your answer.

Traffic: 1715 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6