Entering edit mode
2.6 years ago
halimaakhter014
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0
I am analyzing single-cell multi-omics ATAC seq data and I do not have sc RNA seq data. Is it possible to predict cell type from only sc ATAC seq data in SEURAT?
I think theoretically it should be possible. Have you tried to look at the accessibility of the promotor regions near the marker genes?
What can we "see" with single cell ATAC-seq data ? (e.g. cell cycle - possible or not ? ) Figure here shows that it should be possible