How to mask genotypes in a vcf file
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2.6 years ago
jmukisa90 ▴ 30

Hi there, I am new to bioinformatics and would like to mask genotypes in a .vcf file before imputation. I would like to mask 5% and 10 % of the genotypes. Any unix code to do this is highly helpful.

Regards

genotypes masking • 728 views
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please define "mask genotypes"

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Thank you @Pierre Lindenbaum for your comment. Masking would mean that you make a genotype missing in a file

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