Entering edit mode
2.6 years ago
Raju
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0
I'm dealing with GWAS data and I have 2M records of the .bed file, I'm New to P-link, Can anyone please help me with the Plink command which can Extract all SNPs Id's and their Values with IID, Additive, and dominance components:
Desired Output
ID PAT MAT SEX PHENOTYPE kgp11274425_A kgp11274425_HET kgp5732633_T kgp5732633_HET
45 1 0 0 1 1 1 1 G G ....
281 2 0 0 2 1 0 0 A G ...
4 3 0 0 1 1 1 1 A G ...
65 4 0 0 2 1 2 1 A A ...
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