Entering edit mode
2.6 years ago
sunnykevin97
▴
990
Hi,
I had a 7 different genomes (fish) with 40X genome coverage, sequenced by Nextseq-500.
I used 3 de novo assemblers (Abyss(21,33,44,77), Spades(21,33,44,77), Velvet(31)) for assembly with different kmers.
Removed the redundant contigs using CD-HIT.
Can I used the Metassembler for merging the denovo assemblies ?
Suggestions.