extracting the DATA 9,10,11,12 values by index of letter in seq of an AB1 file
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2.6 years ago
edenn • 0

I'm trying to extract the values of the all the other nucleotides in specific location on the sequence of that i get from biopython seqIO read

   data  = SeqIO.read('./N2_em_nhr_100.ab1', "abi")

I tried Slicing and it erases the annotation field.

sanger AB1 biopython • 524 views
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There is not nearly enough information in this question for us to be able to help.

Extract what values?

What do you mean by all other nucleotides in a specific location? Do you have an alignment?

Posting one line of code which just reads a file isn't useful for helping us debug/write code for the problem.

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