Entering edit mode
2.5 years ago
Neel
▴
20
Hi, I am trying to run CCT blast view and it gives following error
[Error] The following command failed: perl P_aeruginosa_PAO1/cct_projects/dna_vs_dna/cgview_xml_builder.pl -size medium -sequence 'P_aeruginosa_PAO1/cct_projects/dna_vs_dna/reference_genome/P_aeruginosa_PAO1.gbk' -output 'P_aeruginosa_PAO1/cct_projects/dna_vs_dna/maps/cgview_xml/dna_vs_dna_medium.xml'
**build_blast_atlas.sh -p P_aeruginosa_PAO1**
P_aeruginosa_PAO1/cct_projects/dna_vs_dna/features/P_aeruginosa_paerg012.gff . at /home/bvs/neelam/cgview_comparison_tool/scripts/cgview_comparison_tool.pl line 1694.
main::_buildCgviewXml(HASH(0x55a9f0144928), HASH(0x55a9efdb1a90)) called at /home/bvs/neelam/cgview_comparison_tool/scripts/cgview_comparison_tool.pl line 1060
main::_xmlCreation(HASH(0x55a9efdb1a90), Util::Configurator=HASH(0x55a9efff5370), Util::LogManager=HASH(0x55a9efff5730)) called at /home/bvs/neelam/cgview_comparison_tool/scripts/cgview_comparison_tool.pl line 104
Thank you!