SRR sample ID
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2.5 years ago
mahsa • 0

Does anyone know how I can convert SRR sample Id to TCGA sample barcode ?
TCGAbiolinks RNA-seq sampleID R cancer programming • 1.2k views
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By SRR you mean SRA run file ID? Can you post some of the Ids here?

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yes. for example :

**SRR1474440 SRR1447416 SRR1430860 SRR1345871 SRR1446996 SRR1459761 SRR1355997 SRR1359821**
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These IDs come from GTEx through SRA. So they are not part of TCGA and you can not map these SRR ids to the TCGA barcode!

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