Need help in finding pseudo genes using python script

Question

[Confused_human]

Hello Everyone,

I have a genome file in gtf format. I want to find all the pseudo genes from that genome file. Can anyone help me with a python script which can do this work?

Thank you

[LauferVA]

What have you tried so far? There are a couple general approaches for doing this, typically they have different efficacy for different datasets. Anything else you can tell us about your pre-processing?

[Confused_human]

Hi, I have tried normal Linux shell scripting, grep command. But it would be better if I can do it with python.