Question

wgcna without clinical traits

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2.5 years ago

biology_inform ▴ 50

Hi all, I have a RNA-seq data with enough number of samples, but I dont have clinical_traits.csv file can I perform WGCNA without that file ?

wgcna rnaseq • 677 views

ADD COMMENT • link updated 2.5 years ago by i.sudbery 20k • written 2.5 years ago by biology_inform ▴ 50

score 0 · Answer 1 · 2022-06-05

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2.5 years ago

i.sudbery 20k

Yes. The WGCNA algorithm doesn't require any clinical traits, it just has the ability to control for them if required.

ADD COMMENT • link 2.5 years ago by i.sudbery 20k