FASTA sequences extraction
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2.5 years ago

How to extract FASTA sequences for novel transcripts?
FASTA sequences • 737 views
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Could you elaborate a bit the question? How did you predict those novel transcripts? What is the information you have about those novel transcripts?

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I got the GTF file using stringtie having the start and end of each novel transcripts. How to extract the start and end for each transcripts and then the FASTA?

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