Entering edit mode
2.5 years ago
Raju
•
0
Hello,
I have Obesity.glm.linear file with me, but I'm not sure what each column means!!. Can anyone explain the Attribute Information of the following output:
CHROM, POS ,ID, REF, ALT, A1, TEST, OBS_CT, BETA, SE, T_STAT, P
0 0 200610-10 A . . ADD 236 NA NA NA NA
0 0 200610-108 A . . ADD 374 NA NA NA NA
0 0 200610-109 A . . ADD 374 NA NA NA NA
0 0 200610-116 A G G ADD 374 NA NA NA NA
0 0 200610-118 A G G ADD 374 -2.31279 2.32388 -0.995228 0.320274
Especially I would like to know about ALT, A1 and BETA?
https://www.cog-genomics.org/plink/2.0/formats#glm_logistic