Entering edit mode
2.6 years ago
bioinformatics.girl
▴
20
So I'm currently using ArchR for a scATAC-seq analysis, however once I enter my files (i.e. fragment1.tsv.gz, fragment2.tsv.gz, etc.) as the inputFiles, I receive the error after entering the command:
ArrowFiles <- createArrowFiles(
inputFiles = inputFiles,
sampleNames = names(inputFiles),
minTSS = 4,
minFrags = 1000,
addTileMat = TRUE,
force = FALSE,
addGeneScoreMat = TRUE
)
1. In sprintf"%s Reading TabixFile %s Percent", prefix, round(100 * one argument not used by format ' %s Reading TabixFile %s Percent'
. . .
10. In sprintf"%s Reading TabixFile %s Percent", prefix, round(100 * one argument not used by format ' %s Reading TabixFile %s Percent'
I've stayed up hours converting to .tsv and back to .tsv.gz hoping that may alleviate the issue. Nothing.