Entering edit mode
2.5 years ago
bioinformatics.girl
▴
20
Hello-- I am trying to run a pipeline against a dataset (ArchR and Arrow Files), however when I use the following:
ArrowFiles <- c("fragments1.arrow", "fragments2.arrow", "fragments3.arrow")
proj_CAD1<- ArchRProject(
ArrowFiles = ArrowFiles,
outputDirectory = "/work/outputDirectory",
copyArrows = TRUE
)
I receive the following error:
Error in H5Fopen(file, flags=flags, fapl = fapl, native = native): HDF5. File accessibility. Unable to open file.
Any suggestions? (I was wondering if perhaps I can change permissions for the files but I tried to no avail.)
Hey, did you ever get it figured out? I ran into the same issue and can't tell what changed.