Hi I get the following error while testing the nextflow rna-seq pipeline.
Error executing process > 'NFCORE_RNASEQ:RNASEQ:ALIGN_STAR:STAR_ALIGN (WT_REP1)'
Caused by:
java.lang.UnsupportedOperationException
My command to test:
nextflow run nf-core/rnaseq -r 3.8.1 --genome GRCh38 -profile test,singularity --outdir /mnt/hom/
Without --genome GRCh38
option it was working ok.
I would appreciate any help.
Thanks
Dedicated resources for nextflow queries:
https://nf-co.re/join/slack help and rnaseq channels in your case.
&
https://gitter.im/nextflow-io/nextflow
Nextflow's community is now on Slack as well, you can join here: https://www.nextflow.io/slack-invite.html
there must be a hidden file
.nextflow.log
in your working directory. Show use the lines in the context of the error (java stack trace).