TCGA RNA-Seq data and set of conditions
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2.4 years ago
albacaro • 0

Hello,

I'm currently analyzing RNA seq data downloaded from TCGA platform.

In different pages I have seen that, apart from the gene/count matrix, people have a set of conditions, where they can be such as "control" and "infected", or "CellType" and "Status" (example: https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2018/RNASeq2018/html/04_DE_analysis_with_DESeq2.nb.html).

However, I don't know how can I get the sample info for my RNA-Seq data files from TCGA... is it the metadata or the clinical information?

Thanks in advance.

RNA-Seq tcga conditions control • 304 views
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