Entering edit mode
2.4 years ago
albacaro
•
0
Hello,
I'm currently analyzing RNA seq data downloaded from TCGA platform.
In different pages I have seen that, apart from the gene/count matrix, people have a set of conditions, where they can be such as "control" and "infected", or "CellType" and "Status" (example: https://bioinformatics-core-shared-training.github.io/cruk-summer-school-2018/RNASeq2018/html/04_DE_analysis_with_DESeq2.nb.html).
However, I don't know how can I get the sample info for my RNA-Seq data files from TCGA... is it the metadata or the clinical information?
Thanks in advance.