Plotting multiple genes across 4- species

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2.4 years ago

mohsamir2016 ▴ 30

I have a data looks like this This an expression values for several genes (the ensemble IDs) across 4-species of animal . I want to use ggplot to make a line plot for each gene across the species, so that species names are on the X axis and different lines will correspond to different genes

Any help ?

RNA seq • 690 views

ADD COMMENT • link updated 2.4 years ago by swbarnes2 14k • written 2.4 years ago by mohsamir2016 ▴ 30

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Please provide data always using dput() and not as screenshot. Here, move the rownames to a column and then use reshape2::melt() to bring data into long form. From there it should be straight-forward, please try something, one can then help debug. Biostars is generally not a code writing service.

ADD REPLY • link 2.4 years ago by ATpoint 85k

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Well, what have you tried? You presumably googled and found something that you thought might be close to what you want, right? And you tried that? Well, what was that code, and why didn't it work? What about the second bit of code you googled for?

ADD REPLY • link 2.4 years ago by swbarnes2 14k

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