Expression data analysis

Question

[1769mkc]

I would like to do an expression profiling studies of epigenetic factors in normal hematopoietic stem cells vs leukemic cell from RNAseq data. My objective is to find out the deferentially expressed genes which will help me to narrow down my list of candidates for further analysis .Its kind of broad question but im not sure how to exactly proceed

So what kind of statistical approach should I take in terms of analysis ?it would be really helpful i can get some idea some kind of primer to start with.

Answer 1

[WouterDeCoster]

Just googling will give you many tutorials, the RNA-seq workflow from Bioconductor for example.

[1769mkc]

i have seen that but im planning to use TCGA data would you like to give some comment how am I going do analysis of TCGA data sets ?

[1769mkc]

after all these years it helped me