Question

soapdenovo2 installation

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2.3 years ago

Shakunthala Natarajan ▴ 50

I downloaded the soapdenovo2 zip folder and extracted it to get the SOAPdenovo2-master folder. I then changed the present working directory to this folder and typed the make command. For sometime it seems to run, after which, the following error shows up:

/usr/bin/ld: failed to set dynamic section sizes: bad value
collect2: error: ld returned 1 exit status
make: *** [Makefile:54: SOAPdenovo-63mer] Error 1

Can someone please help with this? Thank you!

soapdenovo2 • 1.1k views

ADD COMMENT • link updated 2.3 years ago by Ram 44k • written 2.3 years ago by Shakunthala Natarajan ▴ 50

score 2 · Accepted Answer · 2022-08-11

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2.3 years ago

Ram 44k

Use a package manager such as conda - it will relieve you of these make and config errors.

ADD COMMENT • link 2.3 years ago by Ram 44k

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This worked! Thank you!

ADD REPLY • link 2.3 years ago by Shakunthala Natarajan ▴ 50

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I've moved my comment to an answer. Please accept it to mark the post as solved.

ADD REPLY • link 2.3 years ago by Ram 44k