clarification on rfmix parameters
0
0
Entering edit mode
2.2 years ago
pabe ▴ 30

Hi,

Does anyone know which parameter in RFMix v2.03-r0 controls the conditional random field (CRF) window size?

I'd like to set both the random forest window size (--rf-window-size) and the conditional random field window sizes to 0.5, but the documentation is pretty outdated and only speaks to a CRF spacing size. Is the CRF spacing size the same thing as the window size?

local ancestry genotype rfmix • 493 views
ADD COMMENT

Login before adding your answer.

Traffic: 1523 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6