Is there a tutorial/ demo on single cell nuclei-seq analysis
0
0
Entering edit mode
2.2 years ago
Emily ▴ 70

Is there a tutorial/demo on single cell nuclei-seq (snRNA-seq or sNuc-seq) downstream analysis? I see lots of scRNA-seq when trying to google it but not much on snRNA-seq... I assume it's not too different from scRNA-seq analysis but was wondering what couple flags I should change to analyze. The data I'm trying to analyze is 10x pbmc data.

Any help is much appreciated, thank you.
cell seq single sNuc-seq nuclei-seq sn-RNA • 818 views
ADD COMMENT •
1
Entering edit mode

Some help here : http://bioconductor.org/books/3.14/OSCA.advanced/single-nuclei-rna-seq-processing.html

ADD REPLY •
0
Entering edit mode

Is there a python version or currently only available in R?

ADD REPLY •

Login before adding your answer.

Similar Posts
Loading Similar Posts
Traffic: 2170 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6