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2.1 years ago
pragnapcu
▴
10
I want to pass zipped database files to tableannovar command instead of txt. Here is my command
perl table_annovar.pl sample.avinput AnnovarDb -buildver hg38 -out \ sample -remove -otherinfo -protocol dbscsnv11.txt.gz -operation f \ -nastring . -polish -xref gene_fullxref.txt
I understand this is the way but not able to figure out. Can someone please help me out