Entering edit mode
2.1 years ago
crx6xw
▴
10
Hello
I'm trying to acquire just the gene names present in a seurat object. I know that you can literally just pullnames out with
rownames(GetAssayData(seuratobj, slot = "data"))
but this also includes sequence names (AC00..., etc). I was wondering if there was a way to only just get genes in this slot as opposed to genes and sequences.
I'm also a newbie at scRNAseq so please bear with me.
Thanks
my seurat objects from 10x Chromium data don't include a sequence name in the data matrix rownames