Error in H5Fcreate(file) : HDF5. File accessibility. Unable to open file.
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2.2 years ago
Ri ▴ 30

Hi everyone!

I was trying to use FRASER to identify aberrant splicing events, and got "Error in H5Fcreate(file) : HDF5. File accessibility. Unable to open file."

My code and output (test sample):

fds <- countRNAData(createTestFraserSettings())

Sat Oct 22 20:10:52 2022: Start counting the split reads ...
Sat Oct 22 20:10:52 2022: Count split reads for sample: sample1
Sat Oct 22 20:10:52 2022: Count split reads for sample: sample2
Sat Oct 22 20:10:52 2022: Count split reads for sample: sample3
Sat Oct 22 20:10:56 2022 : count ranges need to be merged ...
Sat Oct 22 20:10:57 2022: Create splice site indices ...
Sat Oct 22 20:10:58 2022: Writing split counts to folder: FRASER_output/savedObjects/Data_Analysis/splitCounts
Error in H5Fcreate(file) : HDF5. File accessibility. Unable to open file.

Do you have any suggestions on this error?

Thank you!

splicing RNASeq HDF5 FRASER aberrant H5F • 698 views
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