Entering edit mode
2.2 years ago
Ri
▴
30
Hi everyone!
I was trying to use FRASER to identify aberrant splicing events, and got "Error in H5Fcreate(file) : HDF5. File accessibility. Unable to open file."
My code and output (test sample):
fds <- countRNAData(createTestFraserSettings())
Sat Oct 22 20:10:52 2022: Start counting the split reads ...
Sat Oct 22 20:10:52 2022: Count split reads for sample: sample1
Sat Oct 22 20:10:52 2022: Count split reads for sample: sample2
Sat Oct 22 20:10:52 2022: Count split reads for sample: sample3
Sat Oct 22 20:10:56 2022 : count ranges need to be merged ...
Sat Oct 22 20:10:57 2022: Create splice site indices ...
Sat Oct 22 20:10:58 2022: Writing split counts to folder: FRASER_output/savedObjects/Data_Analysis/splitCounts
Error in H5Fcreate(file) : HDF5. File accessibility. Unable to open file.
Do you have any suggestions on this error?
Thank you!