Entering edit mode
2.1 years ago
pearl2070
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10
I want to get a matrix of pairwise percent identities between a group of aligned 16S sequences. I'm having trouble identifying what tool to use for this?
Aligned with MUSCLE in MEGA, but I can use a different alignment tool if needed.
Past threads:
Make matrix of protein pairwise identities/similarities from multiple protein sequences
PIM from MUSCLE