Software for Mass cytometry Time of Flight (CyTOF)
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2.0 years ago
yueli7 ▴ 250

Hello,

Anyone know any suitable software for cytometry Time of Flight (CyTOF)?

I know some software such as: FlowSOM, flowMeans, CyTOFpower, CytoDx, CytoML, cytofWorkflow, CytoTree, cytometree, CytoGLMM, imcRtools.

My input file is in the following format. Which one is in good maintenance?

Thank in advance for great help!

Best,

Yue

Screenshot-from-2022-11-25-14-03-59

CyTOF • 718 views
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https://bioconductor.org/packages/release/workflows/html/cytofWorkflow.html

if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")

BiocManager::install("cytofWorkflow")

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