how to programmatically export or download uniprot subcellular
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2.1 years ago
Bioinfo ▴ 20

hi guys,

I am wondering if anyone knows how to download the entire human proteome including sub cellular localization information?

https://www.uniprot.org/uniprotkb?facets=proteins_with%3A50%2Creviewed%3Atrue&query=Human&fields=accession%2Creviewed%2Cid%2Cprotein_name%2Cgene_names%2Corganism_name%2Clength%2Ccc_subcellular_location&view=table

genomics • 527 views
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2.1 years ago
GenoMax 149k

There is a Download button on the linked page. Once you click that, choose TSV tab separated values (make sure to export all) to download the table. Remove any columns you don't want/need.

download

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