deconvolution of spatial transcriptome

Question

[Omics data mining]

Hello everyone

I have analysed spatial transcriptome data for mouse samples belongs to small interstine. We do not have access to single cell data for same patients. Is there any method available for the deconvolution of spatial transcriptome data using machine learning approach ?

I would appreciate all the suggestions.

Thanks in advance

[Ming Tommy Tang]

https://www.nature.com/articles/s41587-022-01273-7

Answer 1

[jv]

https://pachterlab.github.io/LP_2021/current-analysis.html#deconvolution