harmony output
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Entering edit mode
22 months ago
Andy ▴ 120

Hello everyone,

After running the Harmony package for my dataset, I received a warning message from R. Although I am aware that warning messages can be ignored, I just wanted to double-check with others. I hope there is nothing to worry about. The warning messages are:

Warning: Invalid name supplied, making object name syntactically valid. New object name is Seurat..ProjectDim.SCT.harmony; see ?make.names for more details on syntax validity Warning messages: 1: Quick-TRANSfer stage steps exceeded maximum (= 9510000) 2: did not converge in 25 iterations

Harmony R • 1.4k views
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