How do we know that the AMR genes/ MGEs in the contig sequence is on plasmid or Chromosome?
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21 months ago
Kumar ▴ 170

Hi everyone,

I have a set of bacterial contigs genomes generated by Spades assembler. I am trying to find the method for identifying whether the contig sequence is a plasmid or on the Chromosome and identifying the AMR genes and MGEs on the plasmid or chromosome at the contigs.

Thanks

bacteria plasmid • 451 views
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