What happens if you run an already soft-masked sequence on RepeatMasker again?
0
0
Entering edit mode
21 months ago
yh1126 • 0

Do all the already soft-masked (nucleotides in small letters) get counted as repeats by the RepeatMasker and get incorporated to the overall statistics?

repeats • 478 views
ADD COMMENT
0
Entering edit mode

Since it is not mentioned in the documentation, I would assume that they will be treated the same as non masked nucleotides. But it would be great to know what happens, please do share if you try something out :)

ADD REPLY

Login before adding your answer.

Traffic: 2028 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6