Entering edit mode
21 months ago
User 7754
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270
Hi,
What is the preferred software these days for running eQTL analyses, and the largest publicly available datasets?
My impressions are: softwares: matrixEQTL is fast, but I think limited by the linear modeling mixed models could be better.
datasets eQTLGen is the largest dataset publicly available. eQTL Catalogue is also a compendium of datasets.
I was curious what others thought.
Cheers, Fra