Retrieving connected genes from KEGG pathways
0
0
Entering edit mode
21 months ago
Jaehyun ▴ 10

Hello,

I am sorry for an elementary question; I want to ask if there is a method that gets pairs of mutually connected genes in a KEGG pathway.

For example, genes MHCII and TCR are mutually connected in Asthma. I want to retrieve all of these pairs from a given pathway.

Asthma from KEGG pathway database

I looked up other methods, such as KEGG API, but the methods only give different information, such as 'genes in a given pathway.'

I may write down all of the pairs manually, but it would be inefficient, especially if the pathway gets bigger.

I would appreciate it if you could teach me a method for this goal.

Thank you.

data KEGG • 448 views
ADD COMMENT

Login before adding your answer.

Traffic: 1737 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6